Transcript: ENST00000443687.1 TWIST1-002

Description

twist family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:12428]

Gene Synonyms

ACS3, BHLHA38, BPES2, BPES3, CRS1, H-twist, SCS, TWIST, bHLHa38

Location

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 49880 variant alleles and maps to 140 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000242261.5	TWIST1-001	1666	202aa	ENSP00000242261.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5367	Q15672	NM_000474.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354571.5	TWIST1-003	589	135aa	ENSP00000346582.5	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000443687.1	TWIST1-002	527	70aa	ENSP00000416986.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 527 bps, Translation length: 70 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000443687.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000326430 (version 2)