Transcript: ENST00000461952.1 RPL5-004

Description

ribosomal protein L5 [Source:HGNC Symbol;Acc:10360]

Gene Synonyms

DBA6, L5, RNU21, U21

Location

About this transcript

This transcript has 3 exons, is associated with 1780 variant alleles and maps to 270 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370321.3	RPL5-001	1043	297aa	ENSP00000359345.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS741	A2RUM7 B3KTM6 P46777 Q5T7N0 Q8WYP1 R4GNJ2	NM_000969.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000315741.5	RPL5-006	681	130aa	ENSP00000359338.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T7N0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000470843.1	RPL5-003	694	63aa	ENSP00000473675.1	Nonsense mediated decay		R4GNJ2	-	-
ENST00000497519.1	RPL5-005	1210	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461952.1	RPL5-004	1116	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,116 bps,

Version

ENST00000461952.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000030061 (version 1)