Transcript: ENST00000533514.1 MSANTD2-006

Description

Myb/SANT-like DNA-binding domain containing 2 [Source:HGNC Symbol;Acc:26266]

Gene Synonyms

C11orf61, FLJ23342

Location

Chromosome 11: 124,637,730-124,643,276 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 2214 variant alleles and maps to 139 oligo probes.

Gene

This transcript is a product of gene ENSG00000120458.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000239614.4	MSANTD2-001	2495	507aa	ENSP00000239614.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8454	Q6P1R3	NM_024631.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526629.1	MSANTD2-004	3086	329aa	ENSP00000435705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6P1R3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374979.3	MSANTD2-002	2349	559aa	ENSP00000364118.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6P1R3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524950.1	MSANTD2-003	1109	179aa	ENSP00000431707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E1M0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527140.1	MSANTD2-005	775	208aa	ENSP00000434572.1	Nonsense mediated decay		E9PPE2	-	-
ENST00000533514.1	MSANTD2-006	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 582 bps,

Version

ENST00000533514.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000387087 (version 1)

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Transcript: ENST00000533514.1 MSANTD2-006

Summary