Transcript: ENST00000239614.4 MSANTD2-001

Description

Myb/SANT-like DNA-binding domain containing 2 [Source:HGNC Symbol;Acc:26266]

Gene Synonyms

C11orf61, FLJ23342

Location

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 13909 variant alleles and maps to 301 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000526629.1	MSANTD2-004	3086	329aa	ENSP00000435705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6P1R3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000239614.4	MSANTD2-001	2495	507aa	ENSP00000239614.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8454	Q6P1R3	NM_024631.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374979.3	MSANTD2-002	2349	559aa	ENSP00000364118.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6P1R3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524950.1	MSANTD2-003	1109	179aa	ENSP00000431707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E1M0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527140.1	MSANTD2-005	775	208aa	ENSP00000434572.1	Nonsense mediated decay		E9PPE2	-	-
ENST00000533514.1	MSANTD2-006	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,495 bps, Translation length: 507 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6P1R3

CCDS

This transcript is a member of the Human CCDS set: CCDS8454

Version

ENST00000239614.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000387083 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.