Transcript: ENST00000403368.1 FAM98A-004

Description

family with sequence similarity 98, member A [Source:HGNC Symbol;Acc:24520]

Gene Synonyms

DKFZP564F0522

Location

Chromosome 2: 33,808,737-33,824,358 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 7777 variant alleles and maps to 438 oligo probes.

Gene

This transcript is a product of gene ENSG00000119812.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000238823.8	FAM98A-001	2816	518aa	ENSP00000238823.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33179	B4DT23 C9J3G8 Q8NCA5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403368.1	FAM98A-004	2818	312aa	ENSP00000384711.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3G8 E9PH82	NM_015475.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441530.2	FAM98A-201	1539	323aa	ENSP00000408716.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DT23	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431950.1	FAM98A-009	260	68aa	ENSP00000398490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3G8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000498340.1	FAM98A-007	489	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474985.1	FAM98A-002	3546	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475122.1	FAM98A-010	1032	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464415.1	FAM98A-006	655	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492649.1	FAM98A-011	603	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,818 bps, Translation length: 312 residues

Version

ENST00000403368.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000325501 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000403368.1 FAM98A-004

Summary