Transcript: ENST00000554231.1 ALDH6A1-005

Description

aldehyde dehydrogenase 6 family, member A1 [Source:HGNC Symbol;Acc:7179]

Gene Synonyms

MMSADHA, MMSDH

Location

Chromosome 14: 74,537,403-74,551,195 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 5548 variant alleles and maps to 148 oligo probes.

Gene

This transcript is a product of gene ENSG00000119711.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000553458.1	ALDH6A1-001	5499	535aa	ENSP00000450436.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9826	G3V4Z4 Q02252	NM_005589.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350259.4	ALDH6A1-002	1869	522aa	ENSP00000342564.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61501	G3V4Z4 J3KNU8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555126.1	ALDH6A1-007	1382	252aa	ENSP00000452081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4Z4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556852.1	ALDH6A1-006	726	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553814.1	ALDH6A1-004	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000554501.1	ALDH6A1-003	2221	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554231.1	ALDH6A1-005	1323	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,323 bps,

Version

ENST00000554231.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000412313 (version 1)

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Transcript: ENST00000554231.1 ALDH6A1-005

Summary