Transcript: ENST00000554501.1 ALDH6A1-003

Description

aldehyde dehydrogenase 6 family, member A1 [Source:HGNC Symbol;Acc:7179]

Gene Synonyms

MMSADHA, MMSDH

Location

Chromosome 14: 74,526,950-74,551,152 reverse strand.

About this transcript

This transcript has 12 exons, is associated with 9991 variant alleles and maps to 513 oligo probes.

Gene

This transcript is a product of gene ENSG00000119711.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000553458.1	ALDH6A1-001	5499	535aa	ENSP00000450436.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9826	G3V4Z4 Q02252	NM_005589.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350259.4	ALDH6A1-002	1869	522aa	ENSP00000342564.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61501	G3V4Z4 J3KNU8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555126.1	ALDH6A1-007	1382	252aa	ENSP00000452081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4Z4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556852.1	ALDH6A1-006	726	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553814.1	ALDH6A1-004	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000554501.1	ALDH6A1-003	2221	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554231.1	ALDH6A1-005	1323	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 0, Transcript length: 2,221 bps,

Version

ENST00000554501.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000412310 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000554501.1 ALDH6A1-003

Summary