Transcript: ENST00000443941.1 CYP20A1-011

Description

cytochrome P450, family 20, subfamily A, polypeptide 1 [Source:HGNC Symbol;Acc:20576]

Gene Synonyms

CYP-M

Location

Chromosome 2: 204,103,758-204,150,455 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 21391 variant alleles and maps to 177 oligo probes.

Gene

This transcript is a product of gene ENSG00000119004.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356079.4	CYP20A1-001	1949	462aa	ENSP00000348380.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2357	Q53RS5 Q6UW02 Q8WZ13	NM_177538.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429815.2	CYP20A1-003	1812	470aa	ENSP00000407860.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PHG5 Q53RS5 Q8WZ13	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443941.1	CYP20A1-011	804	258aa	ENSP00000411341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J8K7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000431118.1	CYP20A1-005	2636	44aa	ENSP00000388070.1	Nonsense mediated decay		F2Z3K6	-	-
ENST00000449301.1	CYP20A1-002	1730	208aa	ENSP00000414831.1	Nonsense mediated decay		F8WBE2	-	-
ENST00000428265.1	CYP20A1-010	648	44aa	ENSP00000398046.1	Nonsense mediated decay		F2Z3K6	-	-
ENST00000461371.1	CYP20A1-004	1359	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463131.1	CYP20A1-008	674	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489360.1	CYP20A1-009	601	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 804 bps, Translation length: 258 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000443941.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000336171 (version 10)

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Transcript: ENST00000443941.1 CYP20A1-011

Summary