Transcript: ENST00000356079.4 CYP20A1-001

Description

cytochrome P450, family 20, subfamily A, polypeptide 1 [Source:HGNC Symbol;Acc:20576]

Gene Synonyms

CYP-M

Location

Chromosome 2: 204,103,663-204,162,068 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 15 domains and features, is associated with 26806 variant alleles and maps to 551 oligo probes.

Gene

This transcript is a product of gene ENSG00000119004.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356079.4	CYP20A1-001	1949	462aa	ENSP00000348380.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2357	Q53RS5 Q6UW02 Q8WZ13	NM_177538.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429815.2	CYP20A1-003	1812	470aa	ENSP00000407860.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PHG5 Q53RS5 Q8WZ13	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443941.1	CYP20A1-011	804	258aa	ENSP00000411341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J8K7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000431118.1	CYP20A1-005	2636	44aa	ENSP00000388070.1	Nonsense mediated decay		F2Z3K6	-	-
ENST00000449301.1	CYP20A1-002	1730	208aa	ENSP00000414831.1	Nonsense mediated decay		F8WBE2	-	-
ENST00000428265.1	CYP20A1-010	648	44aa	ENSP00000398046.1	Nonsense mediated decay		F2Z3K6	-	-
ENST00000461371.1	CYP20A1-004	1359	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463131.1	CYP20A1-008	674	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489360.1	CYP20A1-009	601	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,949 bps, Translation length: 462 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6UW02

CCDS

This transcript is a member of the Human CCDS set: CCDS2357

Version

ENST00000356079.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256328 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000356079.4 CYP20A1-001

Summary