Transcript: ENST00000433680.1 TNFAIP3-004

Description

tumor necrosis factor, alpha-induced protein 3 [Source:HGNC Symbol;Acc:11896]

Gene Synonyms

A20, OTUD7C, TNFA1P2

Location

Chromosome 6: 138,188,719-138,192,659 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 2146 variant alleles and maps to 72 oligo probes.

Gene

This transcript is a product of gene ENSG00000118503.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000237289.4	TNFAIP3-001	4432	790aa	ENSP00000237289.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5187	D3TTY6 D3TTZ0 D3TTZ5 P21580 Q5PY18 Q5VXQ8 Q5VXQ9 Q5VXR0	NM_006290.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420009.1	TNFAIP3-003	698	162aa	ENSP00000401562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VXQ8 Q5VXQ9 Q5VXR0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000433680.1	TNFAIP3-004	465	98aa	ENSP00000409845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VXQ9 Q5VXR0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000421450.1	TNFAIP3-002	421	25aa	ENSP00000393577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VXR0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000485192.1	TNFAIP3-005	604	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 465 bps, Translation length: 98 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000433680.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000042417 (version 1)

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Transcript: ENST00000433680.1 TNFAIP3-004

Summary