Transcript: ENST00000374291.1 STMN1-005

Description

stathmin 1 [Source:HGNC Symbol;Acc:6510]

Gene Synonyms

C1orf215, FLJ32206, LAP18, Lag, OP18, PP17, PP19, PR22, SMN

Location

Chromosome 1: 26,227,232-26,231,619 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 1903 variant alleles and maps to 305 oligo probes.

Gene

This transcript is a product of gene ENSG00000117632.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000426559.2	STMN1-008	948	174aa	ENSP00000410452.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44090	A2A2D0 P16949	NM_001145454.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399728.1	STMN1-201	1712	149aa	ENSP00000382633.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS269	A2A2D0 P16949	NM_203401.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455785.2	STMN1-001	1504	149aa	ENSP00000387858.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS269	A2A2D0 P16949	NM_203399.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357865.2	STMN1-003	1137	149aa	ENSP00000350531.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS269	A2A2D0 P16949	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374291.1	STMN1-005	867	149aa	ENSP00000363409.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS269	A2A2D0 P16949	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446334.1	STMN1-004	665	85aa	ENSP00000407567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A2D0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465604.1	STMN1-002	2947	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513116.1	STMN1-009	1783	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485226.1	STMN1-007	449	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 867 bps, Translation length: 149 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P16949

CCDS

This transcript is a member of the Human CCDS set: CCDS269

Version

ENST00000374291.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000019359 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000374291.1 STMN1-005

Summary