Transcript: ENST00000466392.1 EDEM3-002

Description

ER degradation enhancer, mannosidase alpha-like 3 [Source:HGNC Symbol;Acc:16787]

Gene Synonyms

C1orf22

Location

Chromosome 1: 184,663,602-184,679,603 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 6201 variant alleles and maps to 166 oligo probes.

Gene

This transcript is a product of gene ENSG00000116406.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318130.8	EDEM3-001	6898	932aa	ENSP00000318147.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1363	H0Y498 Q7L2Y5 Q9BZQ6	NM_025191.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367512.3	EDEM3-201	3008	905aa	ENSP00000356482.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZLZ2 Q7L2Y5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439962.1	EDEM3-005	2872	380aa	ENSP00000390536.1	Nonsense mediated decay		H0Y498 Q7L2Y5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000466392.1	EDEM3-002	491	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474725.1	EDEM3-004	1911	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466606.1	EDEM3-006	487	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 491 bps,

Version

ENST00000466392.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000098696 (version 2)

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Transcript: ENST00000466392.1 EDEM3-002

Summary