Transcript: ENST00000484532.1 RPL22-004

Description

ribosomal protein L22 [Source:HGNC Symbol;Acc:10315]

Gene Synonyms

EAP, HBP15, HBP15/L22, L22

Location

Chromosome 1: 6,241,329-6,257,817 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 7597 variant alleles and maps to 209 oligo probes.

Gene

This transcript is a product of gene ENSG00000116251.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000234875.4	RPL22-001	2078	128aa	ENSP00000346088.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58	K7EJT5 K7ELC4 K7EMH1 K7EP65 K7ERI7 P35268 Q8WYP0	NM_000983.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465335.1	RPL22-006	806	47aa	ENSP00000465313.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497965.1	RPL22-002	786	95aa	ENSP00000468274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5 K7ELC4 K7EMH1 K7EP65 K7ERI7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462296.1	RPL22-008	600	48aa	ENSP00000467247.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5 K7EP65	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000471204.1	RPL22-007	524	89aa	ENSP00000466502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5 K7ELC4 K7EMH1 K7EP65	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465387.1	RPL22-005	508	79aa	ENSP00000466013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5 K7ELC4 K7EP65	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000484532.1	RPL22-004	449	53aa	ENSP00000465763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5 K7EKS7 K7EP65	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480661.1	RPL22-003	2279	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 449 bps, Translation length: 53 residues

Version

ENST00000484532.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000003213 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000484532.1 RPL22-004

Summary