Transcript: ENST00000422767.2 TXNDC9-009

Description

thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:24110]

Gene Synonyms

APACD, PHLP3

Location

Chromosome 2: 99,935,971-99,949,705 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 1 domain and feature, is associated with 5840 variant alleles and maps to 367 oligo probes.

Gene

This transcript is a product of gene ENSG00000115514.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264255.3	TXNDC9-001	1637	226aa	ENSP00000264255.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2044	B8ZZX4 O14530	NM_005783.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409434.1	TXNDC9-002	1111	188aa	ENSP00000387275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z7A4 B8ZZX4 Q8TB70	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434323.1	TXNDC9-006	733	122aa	ENSP00000406388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WCJ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409705.1	TXNDC9-004	568	135aa	ENSP00000386889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZX4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000422767.2	TXNDC9-009	768	64aa	ENSP00000391046.2	Nonsense mediated decay		F8WBV5	-	-
ENST00000438680.1	TXNDC9-008	739	74aa	ENSP00000402827.1	Nonsense mediated decay		F8WBV5 G3XAJ4	-	-
ENST00000477337.1	TXNDC9-005	519	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463385.1	TXNDC9-003	1099	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465183.1	TXNDC9-007	599	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 768 bps, Translation length: 64 residues

Version

ENST00000422767.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000330363 (version 1)

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Transcript: ENST00000422767.2 TXNDC9-009

Summary