Transcript: ENST00000606621.1 TBX18-002

Description

T-box 18 [Source:HGNC Symbol;Acc:11595]

Location

Chromosome 6: 85,470,001-85,473,073 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 1468 variant alleles and maps to 57 oligo probes.

Gene

This transcript is a product of gene ENSG00000112837.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369663.5	TBX18-001	6245	607aa	ENSP00000358677.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34495	O95935 U3KQ31 U3KQQ9	NM_001080508.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000606784.1	TBX18-006	1230	232aa	ENSP00000475873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQ31 U3KQH2 U3KQQ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000606325.1	TBX18-003	742	176aa	ENSP00000475498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQ31 U3KQQ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000606621.1	TBX18-002	717	32aa	ENSP00000476137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQQ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000606521.1	TBX18-004	1262	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000607343.1	TBX18-005	736	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000330469.4	TBX18-007	495	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 717 bps, Translation length: 32 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000606621.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000470357 (version 1)

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Transcript: ENST00000606621.1 TBX18-002

Summary