Transcript: ENST00000606784.1 TBX18-006

Description

T-box 18 [Source:HGNC Symbol;Acc:11595]

Location

Chromosome 6: 85,397,091-85,473,171 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 13 domains and features, is associated with 34660 variant alleles and maps to 272 oligo probes.

Gene

This transcript is a product of gene ENSG00000112837.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369663.5	TBX18-001	6245	607aa	ENSP00000358677.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34495	O95935 U3KQ31 U3KQQ9	NM_001080508.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000606784.1	TBX18-006	1230	232aa	ENSP00000475873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQ31 U3KQH2 U3KQQ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000606325.1	TBX18-003	742	176aa	ENSP00000475498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQ31 U3KQQ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000606621.1	TBX18-002	717	32aa	ENSP00000476137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQQ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000606521.1	TBX18-004	1262	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000607343.1	TBX18-005	736	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000330469.4	TBX18-007	495	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 7, Transcript length: 1,230 bps, Translation length: 232 residues

Version

ENST00000606784.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000470364 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000606784.1 TBX18-006

Summary