Transcript: ENST00000464522.2 SLC1A2-003

Description

solute carrier family 1 (glial high affinity glutamate transporter), member 2 [Source:HGNC Symbol;Acc:10940]

Gene Synonyms

EAAT2, GLT-1, GLT1

Location

Chromosome 11: 35,275,968-35,287,292 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 4538 variant alleles and maps to 151 oligo probes.

Gene

This transcript is a product of gene ENSG00000110436.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000278379.3	SLC1A2-001	11696	574aa	ENSP00000278379.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31459	A2A2U1 P43004	NM_004171.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395753.1	SLC1A2-002	11689	565aa	ENSP00000379102.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55756	A2A2U1 P43004	NM_001252652.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395750.1	SLC1A2-004	11538	565aa	ENSP00000379099.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55756	A2A2U1 P43004	NM_001195728.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000606205.1	SLC1A2-008	1890	563aa	ENSP00000476124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQQ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449068.1	SLC1A2-006	685	199aa	ENSP00000406133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9N5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000464522.2	SLC1A2-003	607	91aa	ENSP00000435406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YEB1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000531628.1	SLC1A2-007	597	199aa	ENSP00000436029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000479543.1	SLC1A2-005	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 607 bps, Translation length: 91 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000464522.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000103330 (version 3)

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Transcript: ENST00000464522.2 SLC1A2-003

Summary