Transcript: ENST00000535700.1 ZBTB16-005

Description

zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:12930]

Gene Synonyms

PLZF, ZNF145

Location

Chromosome 11: 113,930,979-113,934,466 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 8 domains and features, is associated with 1901 variant alleles and maps to 94 oligo probes.

Gene

This transcript is a product of gene ENSG00000109906.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335953.4	ZBTB16-001	2523	673aa	ENSP00000338157.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8367	F5H5Y7 F5H6C3 Q05516 Q71UL5 Q71UL6 Q71UL7	NM_006006.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392996.2	ZBTB16-003	2287	673aa	ENSP00000376721.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8367	F5H5Y7 F5H6C3 Q05516 Q71UL5 Q71UL6 Q71UL7	NM_001018011.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544220.1	ZBTB16-004	773	115aa	ENSP00000437716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6C3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000535700.1	ZBTB16-005	572	148aa	ENSP00000443013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5Y7 F5H6C3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000539918.1	ZBTB16-006	757	55aa	ENSP00000445047.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000535379.1	ZBTB16-008	705	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000545851.1	ZBTB16-007	534	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000541602.1	ZBTB16-002	4427	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000535509.1	ZBTB16-009	727	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 572 bps, Translation length: 148 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000535700.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000398943 (version 1)

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Transcript: ENST00000535700.1 ZBTB16-005

Summary