Transcript: ENST00000527018.1 CTSC-004

Description

cathepsin C [Source:HGNC Symbol;Acc:2528]

Gene Synonyms

CPPI, DPP-I, DPP1, DPPI, HMS, JP, JPD, PALS, PDON1, PLS

Location

Chromosome 11: 88,029,327-88,070,917 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 18768 variant alleles and maps to 195 oligo probes.

Gene

This transcript is a product of gene ENSG00000109861.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000227266.5	CTSC-001	1921	463aa	ENSP00000227266.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8282	I3V9T0 P53634	NM_001814.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524463.1	CTSC-002	6125	137aa	ENSP00000432541.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31654	I3V9T0 P53634	NM_148170.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529974.1	CTSC-003	747	141aa	ENSP00000433539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44693	I3V9T0 P53634	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527018.1	CTSC-004	733	244aa	ENSP00000432556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3V9T0	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000528020.1	CTSC-009	401	36aa	ENSP00000433229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000393301.4	CTSC-008	598	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533865.1	CTSC-005	542	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533897.1	CTSC-010	4344	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534131.1	CTSC-007	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 733 bps, Translation length: 244 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000527018.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000394021 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000527018.1 CTSC-004

Summary