Transcript: ENST00000528020.1 CTSC-009

Description

cathepsin C [Source:HGNC Symbol;Acc:2528]

Gene Synonyms

CPPI, DPP-I, DPP1, DPPI, HMS, JP, JPD, PALS, PDON1, PLS

Location

Chromosome 11: 88,059,254-88,061,366 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 991 variant alleles and maps to 115 oligo probes.

Gene

This transcript is a product of gene ENSG00000109861.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000524463.1	CTSC-002	6125	137aa	ENSP00000432541.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31654	I3V9T0 P53634	NM_148170.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000227266.5	CTSC-001	1921	463aa	ENSP00000227266.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8282	I3V9T0 P53634	NM_001814.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529974.1	CTSC-003	747	141aa	ENSP00000433539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44693	I3V9T0 P53634	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527018.1	CTSC-004	733	244aa	ENSP00000432556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3V9T0	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000528020.1	CTSC-009	401	36aa	ENSP00000433229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000393301.4	CTSC-008	598	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533865.1	CTSC-005	542	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533897.1	CTSC-010	4344	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534131.1	CTSC-007	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 401 bps, Translation length: 36 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000528020.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000394024 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000528020.1 CTSC-009

Summary