Description
nucleoporin 88kDa [Source:HGNC Symbol;Acc:8067]
Gene Synonyms
MGC8530
Location
Chromosome 17: 5,289,346-5,323,480 reverse strand.
About this transcript
This transcript has 17 exons, is annotated with 5 domains and features, is associated with 16620 variant alleles and maps to 630 oligo probes.
Gene
This transcript is a product of gene ENSG00000108559.7 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000573584.1 | NUP88-001 | 2916 | 741aa | ENSP00000458954.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11070 | I3L245 Q99567 | NM_002532.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000225696.4 | NUP88-004 | 2194 | 696aa | ENSP00000225696.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DP20 I3L245 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000572809.1 | NUP88-006 | 771 | 153aa | ENSP00000459370.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L245 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000576708.1 | NUP88-010 | 800 | 110aa | ENSP00000461334.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000572290.1 | NUP88-005 | 615 | 128aa | ENSP00000459979.1 | Nonsense mediated decay | I3L2W3 | - | - | |
| ENST00000573169.1 | NUP88-014 | 1195 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000572019.1 | NUP88-009 | 580 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000574867.1 | NUP88-002 | 2081 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000576862.1 | NUP88-013 | 788 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000575976.1 | NUP88-008 | 599 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000574087.1 | NUP88-011 | 548 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000574855.1 | NUP88-012 | 434 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000570937.1 | NUP88-007 | 361 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |