Transcript: ENST00000574710.1 SLC25A11-002

Description

solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:HGNC Symbol;Acc:10981]

Gene Synonyms

OGC, SLC20A4

Location

Chromosome 17: 4,840,612-4,843,325 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 1519 variant alleles and maps to 457 oligo probes.

Gene

This transcript is a product of gene ENSG00000108528.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000225665.7	SLC25A11-001	1897	314aa	ENSP00000225665.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11059	Q02978 Q6IBH0	NM_003562.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544061.2	SLC25A11-003	952	263aa	ENSP00000440804.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54069	Q02978	NM_001165418.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000576951.1	SLC25A11-004	893	296aa	ENSP00000458993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1P8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000574710.1	SLC25A11-002	2176	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570543.1	SLC25A11-005	322	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 2,176 bps,

Version

ENST00000574710.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000438722 (version 1)

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Transcript: ENST00000574710.1 SLC25A11-002

Summary