Transcript: ENST00000544061.2 SLC25A11-003

Description

solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:HGNC Symbol;Acc:10981]

Gene Synonyms

OGC, SLC20A4

Location

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 1332 variant alleles and maps to 261 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000225665.7	SLC25A11-001	1897	314aa	ENSP00000225665.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11059	Q02978 Q6IBH0	NM_003562.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544061.2	SLC25A11-003	952	263aa	ENSP00000440804.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54069	Q02978	NM_001165418.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000576951.1	SLC25A11-004	893	296aa	ENSP00000458993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1P8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000574710.1	SLC25A11-002	2176	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570543.1	SLC25A11-005	322	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 952 bps, Translation length: 263 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q02978

CCDS

This transcript is a member of the Human CCDS set: CCDS54069

Version

ENST00000544061.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000438723 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.