Transcript: ENST00000476766.1 C10orf2-003

Description

chromosome 10 open reading frame 2 [Source:HGNC Symbol;Acc:1160]

Gene Synonyms

ATXN8, FLJ21832, IOSCA, MTDPS7, PEO, PEO1, PEOA3, SANDO, SCA8, TWINKLE, TWINL

Location

About this transcript

This transcript has 5 exons, is associated with 3256 variant alleles and maps to 250 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311916.2	C10orf2-001	3131	684aa	ENSP00000309595.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7506	E5KSY5 Q96RR1 Q9H6V3	NM_021830.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370228.1	C10orf2-002	3175	582aa	ENSP00000359248.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53570	Q96RR1	NM_001163814.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000473656.1	C10orf2-004	946	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476766.1	C10orf2-003	838	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459764.1	C10orf2-005	327	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 838 bps,

Version

ENST00000476766.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000049888 (version 1)