Transcript: ENST00000520056.1 PPP2CB-010

Description

protein phosphatase 2, catalytic subunit, beta isozyme [Source:HGNC Symbol;Acc:9300]

Gene Synonyms

PP2Abeta, PP2CB

Location

Chromosome 8: 30,651,714-30,667,792 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 11 domains and features, is associated with 7238 variant alleles and maps to 166 oligo probes.

Gene

This transcript is a product of gene ENSG00000104695.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000221138.4	PPP2CB-001	2006	309aa	ENSP00000221138.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6079	E5RFI3 E5RJX4 P62714	NM_001009552.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520056.1	PPP2CB-010	755	125aa	ENSP00000428866.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFI3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518564.1	PPP2CB-002	691	47aa	ENSP00000428142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJX4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520334.1	PPP2CB-004	578	124aa	ENSP00000430758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YC23	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000518243.1	PPP2CB-008	577	184aa	ENSP00000428618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHC1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523023.1	PPP2CB-009	448	52aa	ENSP00000429927.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000520500.1	PPP2CB-007	603	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522113.1	PPP2CB-006	236	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523804.1	PPP2CB-005	1262	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518532.1	PPP2CB-003	566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 755 bps, Translation length: 125 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000520056.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000376576 (version 1)

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Transcript: ENST00000520056.1 PPP2CB-010

Summary