Transcript: ENST00000563838.1 TGM5-004

Description

transglutaminase 5 [Source:HGNC Symbol;Acc:11781]

Gene Synonyms

TGASE5, TGASEX, TGM6, TGMX, TGX

Location

About this transcript

This transcript has 2 exons, is associated with 1048 variant alleles and maps to 57 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000220420.5	TGM5-001	2767	720aa	ENSP00000220420.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32212	O43548	NM_201631.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000349114.4	TGM5-002	1958	638aa	ENSP00000220419.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32211	O43548	NM_004245.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396996.3	TGM5-003	1653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000563838.1	TGM5-004	448	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 448 bps,

Version

ENST00000563838.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000432486 (version 1)