Transcript: ENST00000457085.1 SMS-004

Description

spermine synthase [Source:HGNC Symbol;Acc:11123]

Gene Synonyms

MRSR, SPMSY, SRS, SpS

Location

Chromosome X: 21,959,163-21,996,229 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 14 domains and features, is associated with 13392 variant alleles and maps to 231 oligo probes.

Gene

This transcript is a product of gene ENSG00000102172.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000404933.2	SMS-003	1837	366aa	ENSP00000385746.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14203	P52788	NM_004595.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415881.2	SMS-201	1592	275aa	ENSP00000388906.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DE40	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379404.1	SMS-002	1174	313aa	ENSP00000368714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59161	P52788	NM_001258423.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457085.1	SMS-004	931	311aa	ENSP00000407366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000478094.1	SMS-001	488	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 931 bps, Translation length: 311 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000457085.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000056033 (version 2)

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Transcript: ENST00000457085.1 SMS-004

Summary