Transcript: ENST00000498043.2 CHRNA4-007

Description

cholinergic receptor, nicotinic, alpha 4 (neuronal) [Source:HGNC Symbol;Acc:1958]

Gene Synonyms

BFNC, EBN, EBN1, NACHR, NACHRA4, NACRA4

Location

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 9770 variant alleles and maps to 405 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370263.4	CHRNA4-001	4776	627aa	ENSP00000359285.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13517	P43681 Q4VAQ3 Q5EIU9 Q5EIV0	NM_001256573.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498043.2	CHRNA4-007	2052	137aa	ENSP00000429513.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000463705.1	CHRNA4-002	5201	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475033.1	CHRNA4-003	3660	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467563.1	CHRNA4-004	2098	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480012.1	CHRNA4-006	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,052 bps, Translation length: 137 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000498043.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000377956 (version 1)