Transcript: ENST00000370263.4 CHRNA4-001

Description

cholinergic receptor, nicotinic, alpha 4 (neuronal) [Source:HGNC Symbol;Acc:1958]

Gene Synonyms

BFNC, EBN, EBN1, NACHR, NACHRA4, NACRA4

Location

About this transcript

This transcript has 6 exons, is annotated with 31 domains and features, is associated with 12791 variant alleles and maps to 547 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370263.4	CHRNA4-001	4776	627aa	ENSP00000359285.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13517	P43681 Q4VAQ3 Q5EIU9 Q5EIV0	NM_001256573.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498043.2	CHRNA4-007	2052	137aa	ENSP00000429513.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000463705.1	CHRNA4-002	5201	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475033.1	CHRNA4-003	3660	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467563.1	CHRNA4-004	2098	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480012.1	CHRNA4-006	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 4,776 bps, Translation length: 627 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P43681

CCDS

This transcript is a member of the Human CCDS set: CCDS13517

Version

ENST00000370263.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000080508 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.