Transcript: ENST00000395997.3 SALL4-002

Description

spalt-like transcription factor 4 [Source:HGNC Symbol;Acc:15924]

Gene Synonyms

DRRS, HSAL4, ZNF797, dJ1112F19.1

Location

About this transcript

This transcript has 4 exons, is annotated with 16 domains and features, is associated with 9101 variant alleles and maps to 256 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000217086.4	SALL4-001	3497	1053aa	ENSP00000217086.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13438	Q9UJQ4	NM_020436.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395997.3	SALL4-002	1918	616aa	ENSP00000379319.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UJQ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371539.3	SALL4-201	831	276aa	ENSP00000360594.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6Y8G5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483130.1	SALL4-003	782	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481363.1	SALL4-004	605	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,918 bps, Translation length: 616 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UJQ4

Version

ENST00000395997.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000258918 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.