Transcript: ENST00000217086.4 SALL4-001

Description

spalt-like transcription factor 4 [Source:HGNC Symbol;Acc:15924]

Gene Synonyms

DRRS, HSAL4, ZNF797, dJ1112F19.1

Location

About this transcript

This transcript has 4 exons, is annotated with 44 domains and features, is associated with 9249 variant alleles and maps to 325 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000217086.4	SALL4-001	3497	1053aa	ENSP00000217086.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13438	Q9UJQ4	NM_020436.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395997.3	SALL4-002	1918	616aa	ENSP00000379319.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UJQ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371539.3	SALL4-201	831	276aa	ENSP00000360594.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6Y8G5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483130.1	SALL4-003	782	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481363.1	SALL4-004	605	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,497 bps, Translation length: 1,053 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UJQ4

CCDS

This transcript is a member of the Human CCDS set: CCDS13438

Version

ENST00000217086.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000079738 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.