Transcript: ENST00000465694.1 ABHD12-003

Description

abhydrolase domain containing 12 [Source:HGNC Symbol;Acc:15868]

Gene Synonyms

ABHD12A, BEM46L2, C20orf22, DKFZP434P106, PHARC, dJ965G21.2

Location

Chromosome 20: 25,275,379-25,281,520 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 3696 variant alleles and maps to 126 oligo probes.

Gene

This transcript is a product of gene ENSG00000100997.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000376542.3	ABHD12-002	1725	404aa	ENSP00000365725.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13172	I3L294 I3L440 Q8N2K0	NM_015600.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000339157.5	ABHD12-001	2117	398aa	ENSP00000341408.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42857	I3L294 I3L440 Q8N2K0	NM_001042472.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000491682.1	ABHD12-006	814	159aa	ENSP00000459495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L294 I3L440	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000471287.1	ABHD12-008	805	105aa	ENSP00000460950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L440	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000576316.1	ABHD12-010	620	194aa	ENSP00000459121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1V0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000450393.1	ABHD12-005	615	187aa	ENSP00000413311.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T712	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461204.1	ABHD12-004	712	118aa	ENSP00000460249.1	Nonsense mediated decay		I3L380	-	-
ENST00000465694.1	ABHD12-003	474	13aa	ENSP00000459278.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000481556.1	ABHD12-007	604	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 474 bps, Translation length: 13 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000465694.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000078425 (version 2)

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Transcript: ENST00000465694.1 ABHD12-003

Summary