Transcript: ENST00000489010.1 ZMAT5-002

Description

zinc finger, matrin-type 5 [Source:HGNC Symbol;Acc:28046]

Gene Synonyms

SNRNP20

Location

About this transcript

This transcript has 2 exons, is associated with 8785 variant alleles and maps to 62 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397781.3	ZMAT5-201	1030	170aa	ENSP00000380883.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13868	Q9UDW3	NM_019103.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344318.3	ZMAT5-001	899	170aa	ENSP00000344241.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13868	Q9UDW3	NM_001003692.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489010.1	ZMAT5-002	2468	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,468 bps,

Version

ENST00000489010.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000322115 (version 1)