Transcript: ENST00000344318.3 ZMAT5-001

Description

zinc finger, matrin-type 5 [Source:HGNC Symbol;Acc:28046]

Gene Synonyms

SNRNP20

Location

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 15349 variant alleles and maps to 298 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397781.3	ZMAT5-201	1030	170aa	ENSP00000380883.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13868	Q9UDW3	NM_019103.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344318.3	ZMAT5-001	899	170aa	ENSP00000344241.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13868	Q9UDW3	NM_001003692.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489010.1	ZMAT5-002	2468	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 899 bps, Translation length: 170 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UDW3

CCDS

This transcript is a member of the Human CCDS set: CCDS13868

Version

ENST00000344318.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000322114 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.