Transcript: ENST00000405219.3 XBP1-003

Description

X-box binding protein 1 [Source:HGNC Symbol;Acc:12801]

Gene Synonyms

TREB5, XBP-1, XBP2

Location

Chromosome 22: 29,190,577-29,196,121 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 2769 variant alleles and maps to 340 oligo probes.

Gene

This transcript is a product of gene ENSG00000100219.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216037.6	XBP1-001	1850	261aa	ENSP00000216037.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13847	P17861	NM_005080.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403532.3	XBP1-006	1824	266aa	ENSP00000385162.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AHH2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405219.3	XBP1-003	1690	211aa	ENSP00000384295.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AHH1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344347.5	XBP1-007	1131	376aa	ENSP00000343155.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P17861	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484256.1	XBP1-004	2173	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482720.1	XBP1-005	520	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,690 bps, Translation length: 211 residues

Version

ENST00000405219.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000321276 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000405219.3 XBP1-003

Summary