Transcript: ENST00000403532.3 XBP1-006

Description

X-box binding protein 1 [Source:HGNC Symbol;Acc:12801]

Gene Synonyms

TREB5, XBP-1, XBP2

Location

Chromosome 22: 29,190,545-29,196,546 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 3172 variant alleles and maps to 341 oligo probes.

Gene

This transcript is a product of gene ENSG00000100219.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216037.6	XBP1-001	1850	261aa	ENSP00000216037.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13847	P17861	NM_005080.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403532.3	XBP1-006	1824	266aa	ENSP00000385162.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AHH2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405219.3	XBP1-003	1690	211aa	ENSP00000384295.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AHH1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344347.5	XBP1-007	1131	376aa	ENSP00000343155.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P17861	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484256.1	XBP1-004	2173	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482720.1	XBP1-005	520	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,824 bps, Translation length: 266 residues

Version

ENST00000403532.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000321279 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000403532.3 XBP1-006

Summary