Transcript: ENST00000263208.5 HIRA-001

Description

histone cell cycle regulator [Source:HGNC Symbol;Acc:4916]

Gene Synonyms

DGCR1, HIR, TUP1, TUPLE1

Location

Chromosome 22: 19,318,221-19,419,256 reverse strand.

About this transcript

This transcript has 25 exons, is annotated with 31 domains and features, is associated with 41490 variant alleles and maps to 666 oligo probes.

Gene

This transcript is a product of gene ENSG00000100084.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263208.5	HIRA-001	4053	1017aa	ENSP00000263208.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13759	F5H4M2 P54198	NM_003325.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541063.1	HIRA-201	3436	973aa	ENSP00000446073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H4M2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340170.4	HIRA-002	3395	810aa	ENSP00000345350.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P54198	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546308.1	HIRA-202	2979	806aa	ENSP00000441870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		L7N2F8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452818.1	HIRA-004	453	53aa	ENSP00000404792.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000464189.1	HIRA-003	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 4,053 bps, Translation length: 1,017 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P54198

CCDS

This transcript is a member of the Human CCDS set: CCDS13759

Version

ENST00000263208.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000316488 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000263208.5 HIRA-001

Summary