Transcript: ENST00000452818.1 HIRA-004

Description

histone cell cycle regulator [Source:HGNC Symbol;Acc:4916]

Gene Synonyms

DGCR1, HIR, TUP1, TUPLE1

Location

About this transcript

This transcript has 6 exons, is associated with 21268 variant alleles and maps to 137 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263208.5	HIRA-001	4053	1017aa	ENSP00000263208.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13759	F5H4M2 P54198	NM_003325.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541063.1	HIRA-201	3436	973aa	ENSP00000446073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H4M2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340170.4	HIRA-002	3395	810aa	ENSP00000345350.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P54198	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546308.1	HIRA-202	2979	806aa	ENSP00000441870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		L7N2F8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452818.1	HIRA-004	453	53aa	ENSP00000404792.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000464189.1	HIRA-003	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 453 bps, Translation length: 53 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000452818.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000334594 (version 1)