Transcript: ENST00000313478.7 TRPM7-001

Description

transient receptor potential cation channel, subfamily M, member 7 [Source:HGNC Symbol;Acc:17994]

Gene Synonyms

ALSPDC, CHAK, CHAK1, LTRPC7, TRP-PLIK

Location

Chromosome 15: 50,852,492-50,979,012 reverse strand.

About this transcript

This transcript has 39 exons, is annotated with 17 domains and features, is associated with 61941 variant alleles and maps to 960 oligo probes.

Gene

This transcript is a product of gene ENSG00000092439.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000313478.7	TRPM7-001	7263	1865aa	ENSP00000320239.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42035	Q96QT4	NM_017672.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560955.1	TRPM7-002	7218	1864aa	ENSP00000453277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLN8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560638.1	TRPM7-004	2518	535aa	ENSP00000452873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96QT4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561267.1	TRPM7-010	830	234aa	ENSP00000454066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561443.1	TRPM7-005	1193	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560849.2	TRPM7-007	624	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558444.1	TRPM7-008	465	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560284.1	TRPM7-006	987	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560516.1	TRPM7-009	732	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 39, Coding exons: 39, Transcript length: 7,263 bps, Translation length: 1,865 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96QT4

CCDS

This transcript is a member of the Human CCDS set: CCDS42035

Version

ENST00000313478.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000418604 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000313478.7 TRPM7-001

Summary