Transcript: ENST00000560955.1 TRPM7-002

Description

transient receptor potential cation channel, subfamily M, member 7 [Source:HGNC Symbol;Acc:17994]

Gene Synonyms

ALSPDC, CHAK, CHAK1, LTRPC7, TRP-PLIK

Location

Chromosome 15: 50,852,490-50,978,968 reverse strand.

About this transcript

This transcript has 39 exons, is annotated with 17 domains and features, is associated with 61895 variant alleles and maps to 1096 oligo probes.

Gene

This transcript is a product of gene ENSG00000092439.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000313478.7	TRPM7-001	7263	1865aa	ENSP00000320239.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42035	Q96QT4	NM_017672.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560955.1	TRPM7-002	7218	1864aa	ENSP00000453277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLN8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560638.1	TRPM7-004	2518	535aa	ENSP00000452873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96QT4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561267.1	TRPM7-010	830	234aa	ENSP00000454066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561443.1	TRPM7-005	1193	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560849.2	TRPM7-007	624	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558444.1	TRPM7-008	465	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560284.1	TRPM7-006	987	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560516.1	TRPM7-009	732	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 39, Coding exons: 39, Transcript length: 7,218 bps, Translation length: 1,864 residues

Version

ENST00000560955.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000418603 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000560955.1 TRPM7-002

Summary