Transcript: ENST00000468551.1 SLC26A3-005

Description

solute carrier family 26 (anion exchanger), member 3 [Source:HGNC Symbol;Acc:3018]

Gene Synonyms

CLD, DRA

Location

Chromosome 7: 107,423,275-107,427,967 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 2114 variant alleles and maps to 97 oligo probes.

Gene

This transcript is a product of gene ENSG00000091138.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340010.5	SLC26A3-002	2863	764aa	ENSP00000345873.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5748	C9JFJ2 P40879 Q75N04	NM_000111.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422236.2	SLC26A3-201	2601	651aa	ENSP00000415817.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G5E9U3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453332.1	SLC26A3-003	552	120aa	ENSP00000395955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JFJ2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000379083.3	SLC26A3-001	2602	52aa	ENSP00000368375.3	Nonsense mediated decay		F8WBL6	-	-
ENST00000469651.1	SLC26A3-006	646	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468551.1	SLC26A3-005	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 556 bps,

Version

ENST00000468551.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000337192 (version 1)

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Transcript: ENST00000468551.1 SLC26A3-005

Summary