Transcript: ENST00000527137.1 GNPTG-008

Description

N-acetylglucosamine-1-phosphate transferase, gamma subunit [Source:HGNC Symbol;Acc:23026]

Gene Synonyms

C16orf27, CAB56184, GNPTAG, LP2537, RJD9, c316G12.3

Location

Chromosome 16: 1,401,952-1,402,832 forward strand.

About this transcript

This transcript has 3 exons, is associated with 627 variant alleles and maps to 66 oligo probes.

Gene

This transcript is a product of gene ENSG00000090581.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000204679.4	GNPTG-001	1221	305aa	ENSP00000204679.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10436	Q96RZ2 Q9UJJ9	NM_032520.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529110.1	GNPTG-009	552	184aa	ENSP00000435349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000526820.1	GNPTG-004	572	76aa	ENSP00000434413.1	Nonsense mediated decay		E9PQQ5	-	-
ENST00000527876.1	GNPTG-006	550	76aa	ENSP00000460728.1	Nonsense mediated decay		E9PQQ5	-	-
ENST00000527076.1	GNPTG-003	2400	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527168.1	GNPTG-002	1317	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529957.1	GNPTG-007	922	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527137.1	GNPTG-008	718	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534197.1	GNPTG-005	420	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 718 bps,

Version

ENST00000527137.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000395320 (version 1)

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Transcript: ENST00000527137.1 GNPTG-008

Summary