Transcript: ENST00000465648.1 GP6-004

Description

glycoprotein VI (platelet) [Source:HGNC Symbol;Acc:14388]

Gene Synonyms

BDPLT11, GPIV, GPVI

Location

Chromosome 19: 55,525,894-55,530,187 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 2354 variant alleles and maps to 229 oligo probes.

Gene

This transcript is a product of gene ENSG00000088053.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310373.3	GP6-002	2268	620aa	ENSP00000308782.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42626	K7EIW7 Q9HCN6	NM_001083899.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417454.1	GP6-001	2264	339aa	ENSP00000394922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46184	K7EIW7 Q9HCN6	NM_016363.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000333884.2	GP6-003	2210	321aa	ENSP00000334552.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58678	K7EIW7 Q9HCN6	NM_001256017.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468239.1	GP6-005	876	117aa	ENSP00000464922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EIW7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465648.1	GP6-004	859	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 859 bps,

Version

ENST00000465648.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000357009 (version 1)

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Transcript: ENST00000465648.1 GP6-004

Summary