Transcript: ENST00000395792.2 AFP-001

Description

alpha-fetoprotein [Source:HGNC Symbol;Acc:317]

Gene Synonyms

FETA, HPAFP

Location

Chromosome 4: 74,301,880-74,321,891 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 38 domains and features, is associated with 9093 variant alleles and maps to 551 oligo probes.

Gene

This transcript is a product of gene ENSG00000081051.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395792.2	AFP-001	2484	609aa	ENSP00000379138.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3556	P02771	NM_001134.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000226359.2	AFP-003	1914	622aa	ENSP00000226359.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KMX3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506820.1	AFP-008	476	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515675.1	AFP-004	317	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513720.1	AFP-005	197	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508838.1	AFP-006	728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514279.1	AFP-007	693	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,484 bps, Translation length: 609 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P02771

CCDS

This transcript is a member of the Human CCDS set: CCDS3556

Version

ENST00000395792.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252284 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000395792.2 AFP-001

Summary