Transcript: ENST00000397132.2 TULP3-004

Description

tubby like protein 3 [Source:HGNC Symbol;Acc:12425]

Gene Synonyms

TUBL3

Location

Chromosome 12: 3,000,073-3,050,296 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 18 domains and features, is associated with 24026 variant alleles and maps to 446 oligo probes.

Gene

This transcript is a product of gene ENSG00000078246.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397132.2	TULP3-004	1951	501aa	ENSP00000380321.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53737	F5H7B9 F8WBZ9	NM_001160408.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448120.2	TULP3-001	3076	442aa	ENSP00000410051.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8519	F5H7B9 O75386	NM_003324.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544943.1	TULP3-005	548	137aa	ENSP00000442631.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H7B9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000541678.1	TULP3-008	542	133aa	ENSP00000441319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000538704.1	TULP3-007	449	109aa	ENSP00000440364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000545331.1	TULP3-002	1373	39aa	ENSP00000441599.1	Nonsense mediated decay		F5GWL5	-	-
ENST00000538354.1	TULP3-003	1229	39aa	ENSP00000437899.1	Nonsense mediated decay		F5GWL5	-	-
ENST00000540184.1	TULP3-006	978	170aa	ENSP00000444110.1	Nonsense mediated decay		B7Z6A2	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,951 bps, Translation length: 501 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS53737

Version

ENST00000397132.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000398469 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000397132.2 TULP3-004

Summary