Transcript: ENST00000566445.1 ADAT1-002

Description

adenosine deaminase, tRNA-specific 1 [Source:HGNC Symbol;Acc:228]

Gene Synonyms

HADAT1

Location

Chromosome 16: 75,632,998-75,656,364 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 1 domain and feature, is associated with 12920 variant alleles and maps to 576 oligo probes.

Gene

This transcript is a product of gene ENSG00000065457.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307921.3	ADAT1-001	1869	502aa	ENSP00000310015.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10922	H3BP18 H3BU72 Q9BUB4	NM_012091.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564657.1	ADAT1-006	731	109aa	ENSP00000457501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BU72	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562374.1	ADAT1-005	582	10aa	ENSP00000456751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567281.1	ADAT1-008	547	160aa	ENSP00000455108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP18 H3BU72	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000566450.1	ADAT1-010	501	120aa	ENSP00000455121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP27	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000568510.1	ADAT1-011	459	18aa	ENSP00000455000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000566445.1	ADAT1-002	2768	103aa	ENSP00000456768.1	Nonsense mediated decay		H3BSM1	-	-
ENST00000568001.1	ADAT1-009	570	91aa	ENSP00000457999.1	Nonsense mediated decay		H3BV89	-	-
ENST00000568478.1	ADAT1-004	644	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000565109.1	ADAT1-007	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 3, Transcript length: 2,768 bps, Translation length: 103 residues

Version

ENST00000566445.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000435500 (version 1)

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Transcript: ENST00000566445.1 ADAT1-002

Summary