Transcript: ENST00000565109.1 ADAT1-007

Description

adenosine deaminase, tRNA-specific 1 [Source:HGNC Symbol;Acc:228]

Gene Synonyms

HADAT1

Location

Chromosome 16: 75,651,123-75,657,173 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 3752 variant alleles and maps to 198 oligo probes.

Gene

This transcript is a product of gene ENSG00000065457.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307921.3	ADAT1-001	1869	502aa	ENSP00000310015.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10922	H3BP18 H3BU72 Q9BUB4	NM_012091.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564657.1	ADAT1-006	731	109aa	ENSP00000457501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BU72	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562374.1	ADAT1-005	582	10aa	ENSP00000456751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567281.1	ADAT1-008	547	160aa	ENSP00000455108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP18 H3BU72	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000566450.1	ADAT1-010	501	120aa	ENSP00000455121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP27	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000568510.1	ADAT1-011	459	18aa	ENSP00000455000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000566445.1	ADAT1-002	2768	103aa	ENSP00000456768.1	Nonsense mediated decay		H3BSM1	-	-
ENST00000568001.1	ADAT1-009	570	91aa	ENSP00000457999.1	Nonsense mediated decay		H3BV89	-	-
ENST00000568478.1	ADAT1-004	644	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000565109.1	ADAT1-007	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 574 bps,

Version

ENST00000565109.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000435505 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000565109.1 ADAT1-007

Summary