Transcript: ENST00000505366.1 ZFR-002

Description

zinc finger RNA binding protein [Source:HGNC Symbol;Acc:17277]

Gene Synonyms

ZFR1

Location

Chromosome 5: 32,406,832-32,444,844 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 18433 variant alleles and maps to 220 oligo probes.

Gene

This transcript is a product of gene ENSG00000056097.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265069.8	ZFR-001	4738	1074aa	ENSP00000265069.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34139	B3KP82 Q96KR1	NM_016107.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507465.1	ZFR-004	1140	182aa	ENSP00000422300.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000510369.1	ZFR-005	1551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514356.1	ZFR-006	3109	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502988.1	ZFR-007	2184	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505366.1	ZFR-002	1159	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505204.1	ZFR-008	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,159 bps,

Version

ENST00000505366.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000366587 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000505366.1 ZFR-002

Summary