Transcript: ENST00000513118.1 THOC3-006

Description

THO complex 3 [Source:HGNC Symbol;Acc:19072]

Gene Synonyms

MGC5469, TEX1, THO3, hTREX45

Location

Chromosome 5: 175,388,145-175,392,271 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 2051 variant alleles and maps to 272 oligo probes.

Gene

This transcript is a product of gene ENSG00000051596.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265097.4	THOC3-001	1589	351aa	ENSP00000265097.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4397	Q96J01	NM_032361.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513482.1	THOC3-004	1796	327aa	ENSP00000422243.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6NZ53	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505969.1	THOC3-008	683	56aa	ENSP00000424967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000514861.1	THOC3-010	628	166aa	ENSP00000425039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6REC9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432305.2	THOC3-003	453	75aa	ENSP00000394166.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000515016.1	THOC3-002	250	57aa	ENSP00000425781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YA11	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000514250.1	THOC3-009	649	13aa	ENSP00000427267.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000511062.1	THOC3-011	642	55aa	ENSP00000427029.1	Nonsense mediated decay		H0YAG7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000513006.1	THOC3-007	602	105aa	ENSP00000421082.1	Nonsense mediated decay		D6RGZ2	-	-
ENST00000510300.1	THOC3-005	699	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513118.1	THOC3-006	490	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 490 bps,

Version

ENST00000513118.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000371977 (version 1)

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Transcript: ENST00000513118.1 THOC3-006

Summary