Transcript: ENST00000480853.1 LSG1-002

Description

large 60S subunit nuclear export GTPase 1 [Source:HGNC Symbol;Acc:25652]

Gene Synonyms

FLJ11301

Location

Chromosome 3: 194,390,792-194,393,192 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1100 variant alleles and maps to 77 oligo probes.

Gene

This transcript is a product of gene ENSG00000041802.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265245.5	LSG1-001	3572	658aa	ENSP00000265245.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33922	Q9H089	NM_018385.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437613.1	LSG1-004	854	285aa	ENSP00000408264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000427461.1	LSG1-003	755	178aa	ENSP00000400903.1	Nonsense mediated decay		F8WFC6	-	-
ENST00000480853.1	LSG1-002	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466391.1	LSG1-006	791	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460584.1	LSG1-007	668	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475763.1	LSG1-008	590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461343.1	LSG1-005	428	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 539 bps,

Version

ENST00000480853.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000342741 (version 1)

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Transcript: ENST00000480853.1 LSG1-002

Summary